species:   Comil
pid:       PID1136
parent:    milR4
paralog:   
locus:     NW_006271969.1:2469972-2470057
matures:   ['AGUCCGACGACGAGGAGCC', 'AACUGCCGUCUUCGGACUGCGCCA']
srr:       SRR8054059
genome:    /Users/jax/+Genomes/Fungal_genomes/Comil.GCF_000225605.1_CmilitarisCM01_v01_genomic.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Shao2019-xf.SRR8054059.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Shao2019-xf.SRR8054059.cram NW_006271969.1:2469972-2470057

0 out of bounds
4 alignments
2 proper strand
0 stranded perfect matches

                  *********************   **************************                  
UGCAGAUAGCGGGGGCAAUGAGUCCGACGACGAGGAGCCCGGGGAACUGCCGUCUUCGGACUGCGCCAUCUGUUCCUGUCUAUGCA
((((....(((((((((((((((((((.((((.(.((((...))..)).))))).)))))))....))).)))))))))...))))
--------------------AGUCCGACGACGAGGAGCC----------------------------------------------- l=19 a=0 c
--------------------------------------------AACUGCCGUCUUCGGACUGCGCCA------------------ l=24 a=0 c*
--------------------AGUCCGACGACGAGGAGCC----------------------------------------------- l=19 a=0 ma
--------------------------------------------AACUGCCGUCUUCGGACUGCGCCA------------------ l=24 a=0 ma*


No alignments to locus

mb-00011
ax-1001001
ku-01
ss-100010001000
fn-001
